pairk
stable
  • Getting Started
  • Pairk - tutorial
  • PairK examples - interpreting pairk conservation results
  • PairK alignment - in depth
  • API Documentation
  • References and acknowledgements
pairk
  • Overview: module code

All modules for which code is available

  • pairk.backend.conservation.kmer_conservation
  • pairk.backend.kmer_alignment.esm_embedding_distance
  • pairk.backend.kmer_alignment.needleman_tools
  • pairk.backend.kmer_alignment.scoring_matrix
  • pairk.backend.kmer_alignment.scoring_matrix_needleman
  • pairk.backend.tools.esm_tools
  • pairk.backend.tools.matrices
  • pairk.backend.tools.pairwise_tools
  • pairk.backend.tools.sequence_utils
  • pairk.utilities

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